#include "nucleotide_count.h" #define BOOST_TEST_MAIN #include #include namespace boost { // teach Boost.Test how to print std::pair template inline wrap_stringstream& operator<<(wrap_stringstream& wrapped, std::pair const& item) { return wrapped << '<' << item.first << ',' << item.second << '>'; } } BOOST_AUTO_TEST_CASE(has_no_nucleotides) { const dna::counter dna(""); const std::map expected{ {'A', 0}, {'T', 0}, {'C', 0}, {'G', 0} }; const auto actual = dna.nucleotide_counts(); BOOST_REQUIRE_EQUAL_COLLECTIONS(expected.begin(), expected.end(), actual.begin(), actual.end()); } #if defined(EXERCISM_RUN_ALL_TESTS) BOOST_AUTO_TEST_CASE(has_no_adenosine) { const dna::counter dna(""); BOOST_REQUIRE_EQUAL(0, dna.count('A')); } BOOST_AUTO_TEST_CASE(repetitive_cytidine_gets_counts) { const dna::counter dna("CCCCC"); BOOST_REQUIRE_EQUAL(5, dna.count('C')); } BOOST_AUTO_TEST_CASE(repetitive_sequence_has_only_guanosine) { const dna::counter dna("GGGGGGGG"); const std::map expected{ {'A', 0}, {'T', 0}, {'C', 0}, {'G', 8} }; const auto actual = dna.nucleotide_counts(); BOOST_REQUIRE_EQUAL_COLLECTIONS(expected.begin(), expected.end(), actual.begin(), actual.end()); } BOOST_AUTO_TEST_CASE(counts_only_thymidine) { const dna::counter dna("GGGGTAACCCGG"); BOOST_REQUIRE_EQUAL(1, dna.count('T')); } BOOST_AUTO_TEST_CASE(counts_a_nucleotide_only_once) { const dna::counter dna("GGTTGG"); dna.count('T'); BOOST_REQUIRE_EQUAL(2, dna.count('T')); } BOOST_AUTO_TEST_CASE(validates_nucleotides) { const dna::counter dna("GGTTGG"); BOOST_REQUIRE_THROW(dna.count('X'), std::invalid_argument); } BOOST_AUTO_TEST_CASE(counts_all_nucleotides) { const dna::counter dna("AGCTTTTCATTCTGACTGCAACGGGCAATATGTCTCTGTGTGGATTAAAAAAAGAGTGTCTGATAGCAGC"); std::map expected{ {'A', 20}, {'T', 21}, {'G', 17}, {'C', 12} }; auto actual = dna.nucleotide_counts(); BOOST_REQUIRE_EQUAL_COLLECTIONS(expected.begin(), expected.end(), actual.begin(), actual.end()); } #endif